google/deepsomatic:1.9.0

Manifest digest

sha256:d9797b8950bf615ec7010d1336b7ee0a2f12ea09323dc3585f7e9fe39b082bde

OS/ARCH

linux/amd64

Compressed size

7.23 GB

Last pushed

over 1 year by pichuan

Type

Image

Manifest digest

sha256:d9797b8950bf615ec7010d1336b7ee0a2f12ea09323dc3585f7e9fe39b082bde

Image Layers

Image Layers

1ARG RELEASE0 B

2ARG LAUNCHPAD_BUILD_ARCH0 B

3LABEL org.opencontainers.image.ref.name=ubuntu0 B

4LABEL org.opencontainers.image.version=22.040 B

5ADD file ... in / 29.03 MB

6CMD ["/bin/bash"]0 B

7ARG DV_GPU_BUILD0 B

8ARG VERSION_DEEPSOMATIC0 B

9ARG PYTHON_VERSION0 B

10ARG TF_ENABLE_ONEDNN_OPTS0 B

11ENV DV_GPU_BUILD=00 B

12ENV VERSION_DEEPSOMATIC=1.9.00 B

13ENV PYTHON_VERSION=3.100 B

14ENV TF_ENABLE_ONEDNN_OPTS=10 B

15WORKDIR /opt/0 B

16COPY file:4d8220a9f7a8e48c90ffc4faa237bbd31c4954fb0417399e613f057ad91e29df in . 21.98 KB

17WORKDIR /opt/deepvariant/bin/166 B

18COPY dir:4e1dbdb5a4fc1e820b743c13e49f2d6405cf72fe84c26a9cb11f6c1c490faeaa in /opt/conda 230.95 MB

19COPY file:4d7071fa8409fc93bb85c4dbc90eae4ece16679b9e2681f168c2a77623becc4a in . 4.62 KB

20COPY file:302e27b40c45efa6eaeb10cbd94081adc73702c088120c4d6623d16bbedfefe6 in . 2.85 KB

21COPY file:733d4f2b81996e52f2b28bb14cb5ad29f65ce0a8b5dda49c319ca06e6bbadb2d in . 9.1 MB

22COPY file:c2c45b86b8e0fdf7787b43109e59d9056760b298b6c888c34615dac54885c416 in . 9.02 MB

23COPY file:614a9ca6924c1d324dc3550b2a200f9d89a0830c95f41849fab1f0c446033d97 in . 9.01 MB

24COPY file:171224b889eebf1b684c2efca19934f05783a49d9b3afc43e3be77c4699030b9 in . 8.94 MB

25COPY file:6999a2fddd055dc933640a7567e76f67e003469ae98dcac54484926fe2662a5a in . 8.94 MB

26COPY file:71c53142c3bc252f5796744f1bd6af3bed5ec01969455c2e95f170fd1614d80d in . 133.92 KB

27COPY file:58cef9c7ca270fcfc681c533d378c6523c8c5fe81cfcc9449b468121ffa7ea3c in ./deepsomatic/ 8.35 KB

28/bin/sh -c ./run-prereq.sh2.07 GB

29/bin/sh -c update-alternatives --install /usr/bin/python31.46 KB

30/bin/sh -c BASH_HEADER='#!/bin/bash' && 452 B

31WORKDIR /opt/models/deepsomatic/wgs185 B

32ADD multi:d55da4f20175b2bf51cceeee54994f7162b2aa6a08029c6eedc56286985044e9 in ./ 342.28 KB

33WORKDIR /opt/models/deepsomatic/wgs/variables206 B

34ADD multi:046acdf451a3fefab82951386a3ac59519a60e1f99de867deacb16a5b69ab4b6 in ./ 76.34 MB

35/bin/sh -c chmod -R +r76.68 MB

36WORKDIR /opt/models/deepsomatic/wes189 B

37ADD multi:362ea27c991f13afa6249ecd458b71a10d0cea84cd2d3715b7780151eae14cc1 in ./ 342.28 KB

38WORKDIR /opt/models/deepsomatic/wes/variables210 B

39ADD multi:f4f760c5714cb21ccb583dfc3b78b1999e7b26159f015153a3ec0de900345039 in ./ 77.58 MB

40/bin/sh -c chmod -R +r77.92 MB

41WORKDIR /opt/models/deepsomatic/pacbio189 B

42ADD multi:5b5926ff20f6e48cfed2b78dfe089b7c082ae68b8ac06f89821a97d7865bf25c in ./ 342.25 KB

43WORKDIR /opt/models/deepsomatic/pacbio/variables213 B

44ADD multi:01527f28a01064763a28f677ac95afed52ab1c197f613ee088ad5671a17ac46e in ./ 77.39 MB

45/bin/sh -c chmod -R +r77.72 MB

46WORKDIR /opt/models/deepsomatic/ont189 B

47ADD multi:01095b99b737fe4757102b8743f70ae5c036fd74bc52fea7b2c06f61ddf98b0c in ./ 342.09 KB

48WORKDIR /opt/models/deepsomatic/ont/variables212 B

49ADD multi:2ca7cc8d4f4ffa82674957d228650ab5a65c60003f117a111860604dd4ec76f3 in ./ 76.12 MB

50/bin/sh -c chmod -R +r76.45 MB

51WORKDIR /opt/models/deepsomatic/ffpe_wgs192 B

52ADD multi:a78fd435a456776b776bb8fd21b6925703db1118444f8ffa346bc45e59984f75 in ./ 342.28 KB

53WORKDIR /opt/models/deepsomatic/ffpe_wgs/variables210 B

54ADD multi:56205e8287297564099ccdb6add85ccf67508fb78c8bee9709100b18660faaa0 in ./ 78.27 MB

55/bin/sh -c chmod -R +r78.61 MB

56WORKDIR /opt/models/deepsomatic/ffpe_wes195 B

57ADD multi:4d52abc18b949b89e95be6a50ef25abf1540e99e89b5380267cb8acc04102aa5 in ./ 342.28 KB

58WORKDIR /opt/models/deepsomatic/ffpe_wes/variables212 B

59ADD multi:fd82e7f12d902d32c2c0a993ae130102250427738923f0db8e41e30352b4b05b in ./ 78.56 MB

60/bin/sh -c chmod -R +r78.9 MB

61WORKDIR /opt/models/deepsomatic/wgs_tumor_only200 B

62ADD multi:9c24a5a32a49e1f77825c6dc29b4fcc7c2c1e40b2039b71182361548242b4c58 in ./ 342.1 KB

63WORKDIR /opt/models/deepsomatic/wgs_tumor_only/variables223 B

64ADD multi:66e6f54ee1c9c14bcdac39cedf57721d31202606eaa5c2e479250bdc8508040c in ./ 77.21 MB

65/bin/sh -c chmod -R +r77.54 MB

66WORKDIR /opt/models/deepsomatic/wes_tumor_only198 B

67ADD multi:52bc6165a139781a29555ca23ca9bb575cb7199f86a8e0eed12149576b7e0e00 in ./ 342.1 KB

68WORKDIR /opt/models/deepsomatic/wes_tumor_only/variables219 B

69ADD multi:d1f3f762b0c7ed5fdcb5a95f54728cf077082a77db73d8baef02d59005471b22 in ./ 76.92 MB

70/bin/sh -c chmod -R +r77.25 MB

71WORKDIR /opt/models/deepsomatic/pacbio_tumor_only201 B

72ADD multi:30fcb9136f8ba168d7be0e3326f4444d1325fdd914c50969048632c4a1da48f1 in ./ 341.72 KB

73WORKDIR /opt/models/deepsomatic/pacbio_tumor_only/variables225 B

74ADD multi:ea2f072767bee687e5d7ca8de224f3794432d681d01f6c54a3ce4bbfb105cbec in ./ 76.37 MB

75/bin/sh -c chmod -R +r76.7 MB

76WORKDIR /opt/models/deepsomatic/ont_tumor_only200 B

77ADD multi:77283580da4628a9e7c3463a810c6fd98777d3532fe2981d704b05f7cadb501a in ./ 341.71 KB

78WORKDIR /opt/models/deepsomatic/ont_tumor_only/variables221 B

79ADD multi:a45f03cf5fc2b16a445dfa8988ed0a7b701150451a83ece679e447328f933798 in ./ 76.59 MB

80/bin/sh -c chmod -R +r76.92 MB

81WORKDIR /opt/models/deepsomatic/ffpe_wgs_tumor_only204 B

82ADD multi:77cdca1170fa47b076c1727aa7cdd56d2d6e41fa378c273a50acf8325a676176 in ./ 342.1 KB

83WORKDIR /opt/models/deepsomatic/ffpe_wgs_tumor_only/variables225 B

84ADD multi:dea8cb25f061a8d18a55503bc97597e8c92ee062bc7261eef5716f04aa1bdf4d in ./ 77.14 MB

85/bin/sh -c chmod -R +r77.48 MB

86WORKDIR /opt/models/deepsomatic/ffpe_wes_tumor_only203 B

87ADD multi:83241daafaa185de87980dcb0de4ec4f16e060327f75df3bcf2db911852525e6 in ./ 342.11 KB

88WORKDIR /opt/models/deepsomatic/ffpe_wes_tumor_only/variables225 B

89ADD multi:e4d6af06e2dfac4a53251c044203c5af2d439fa7c2142de4dbf9cf886fb3d152 in ./ 78.58 MB

90/bin/sh -c chmod -R +r78.92 MB

91WORKDIR /opt/models/deepsomatic/pons190 B

92ADD multi:d2c3e35e8b1ab1cee9ba7092125e6f91a4d5966d18522584c19354a298b1ae03 in ./ 1.51 GB

93/bin/sh -c chmod -R +r1.51 GB

94

ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/conda/bin:/opt/conda/envs/bio/bin:/opt/deepvariant/bin/deepsomatic:/opt/deepvariant/bin

0 B

95/bin/sh -c apt-get -y update35.65 MB

96WORKDIR /opt/deepvariant0 B

97CMD ["/opt/deepvariant/bin/deepsomatic/run_deepsomatic" "--help"]0 B

Command

 ARG RELEASE