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staphb/artic:1.6.2

Index digest

sha256:6856f5cb658758910633210582c590165b7027e76f9c6d26fd2fe82f017aa303

OS/ARCH

linux/amd64

Compressed size

1.98 GB

Last pushed

over 1 year by staphbadmin

Type

Image

Manifest digest

sha256:cedf7f79dd2c16949c112e6e89d49ef8938f43b032df517a0a353a89cbb0aba7

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=22.040 B
5ADD file ... in / 28.17 MB
6CMD ["/bin/bash"]0 B
7ARG CERT_SOURCE=/etc/ssl/certs/ca-certificates.crt0 B
8ARG MAMBA_USER=mambauser0 B
9ARG MAMBA_USER_ID=574390 B
10ARG MAMBA_USER_GID=574390 B
11ENV MAMBA_USER=mambauser0 B
12ENV MAMBA_USER_ID=574390 B
13ENV MAMBA_USER_GID=574390 B
14ENV LANG=C.UTF-8 LC_ALL=C.UTF-80 B
15ENV ENV_NAME=base0 B
16ENV MAMBA_ROOT_PREFIX=/opt/conda0 B
17ENV MAMBA_EXE=/bin/micromamba0 B
18COPY /bin/micromamba /bin/micromamba # buildkit6.35 MB
19COPY /etc/ssl/certs/ca-certificates.crt /etc/ssl/certs/ca-certificates.crt # buildkit123.59 KB
20COPY _dockerfile_initialize_user_accounts.sh /usr/local/bin/_dockerfile_initialize_user_accounts.sh # buildkit551 B
21COPY _dockerfile_setup_root_prefix.sh /usr/local/bin/_dockerfile_setup_root_prefix.sh # buildkit285 B
22RUN |4 CERT_SOURCE=/etc/ssl/certs/ca-certificates.crt MAMBA_USER=mambauser MAMBA_USER_ID=5743922.06 KB
23USER mambauser0 B
24WORKDIR /tmp32 B
25COPY _entrypoint.sh /usr/local/bin/_entrypoint.sh # buildkit685 B
26COPY _activate_current_env.sh /usr/local/bin/_activate_current_env.sh # buildkit647 B
27ENTRYPOINT ["/usr/local/bin/_entrypoint.sh"]0 B
28CMD ["/bin/bash"]0 B
29COPY _dockerfile_shell.sh /usr/local/bin/_dockerfile_shell.sh # buildkit344 B
30SHELL [/usr/local/bin/_dockerfile_shell.sh]0 B
31ARG ARTIC_VER=1.6.20 B
32LABEL base.image=mambaorg/micromamba:2.0.5-ubuntu22.040 B
33LABEL dockerfile.version=10 B
34LABEL software=artic0 B
35LABEL software.version=1.6.20 B
36LABEL description=A bioinformatics pipeline for0 B
37LABEL website=https://github.com/artic-network/fieldbioinformatics0 B
38LABEL license=https://github.com/artic-network/fieldbioinformatics/blob/master/LICENSE0 B
39LABEL sop=https://artic.network/ncov-2019/ncov2019-bioinformatics-sop.html0 B
40LABEL maintainer=Erin Young0 B
41LABEL [email protected]0 B
42USER root0 B
43WORKDIR /0 B
44RUN |1 ARTIC_VER=1.6.2 /usr/local/bin/_dockerfile_shell.sh apt-get1.38 MB
45RUN |1 ARTIC_VER=1.6.2 /usr/local/bin/_dockerfile_shell.sh micromamba666.28 MB
46ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/conda/envs/artic/bin/ CONDA_PREFIX=/opt/conda/envs/artic/ LC_ALL=C.UTF-80 B
47RUN |1 ARTIC_VER=1.6.2 /usr/local/bin/_dockerfile_shell.sh artic_get_models1.29 GB
48CMD ["artic" "--help"]0 B
49WORKDIR /data32 B

Command

 ARG RELEASE