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staphb

StaPH-B

Sponsored OSS

Community Organization

State Public Health Bioinformatics Community

Displaying 1 to 30 of 264 repositories

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Plotting tool for long read sequencing data and alignments

7h

10K+

1

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Software package for assigning SARS-CoV-2 genome sequences to global lineages

2d

1M+

4

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Freyja: recover relative lineage abundances from mixed SARS-CoV-2 samples from a sequencing dataset

3d

100K+

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polypolish: a tool for polishing genome assemblies with short reads

3d

10K+

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Viral Annotation DefineR: classification and annotation of viral sequences

4d

1M+

2

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NCBI Datasets: easily gather data from across NCBI databases

8d

10K+

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Fast genome and metagenome distance estimation using MinHash http://mash.readthedocs.org

10d

50K+

3